Use case gallery - Amira-Avizo Software

Featured articles of Thermo Scientific 3D image analysis software

Below you will find a collection of use cases of our 3D data visualization and analysis software. These use cases include scientific publications, articles, papers, posters, or presentations that show how Amira Software and Avizo Software are used to address various scientific and industrial research topics.

Select an industry and then applications or type in a search term to see cases related to specific topics you are interested in.

Industry

Applications

The human middle ear in motion: 3D visualization and quantification using dynamic synchrotron based X-ray imaging

Margaux Schmeltz, Aleksandra Ivanovic, Christian M. Schlepütz, Wilhelm Wimmer, Aaron K. Remenschneider, Marco Caversaccio, Marco Stampanoni, Lukas Anschuetz & Anne…

Could tumour volume and major and minor axis based on CTA statistical anatomy improve the pre-operative T-stage in oesophageal cancer?

Runyuan Wang, Xiaoqin Zhang, Wei Wu, Jinfeng Ma, Jincheng Chen, Zhu Zhang, Liqun Liu, Shanshan Xu, Ximei Cao, Yi Wu,…

In situ architecture of the intercellular organelle reservoir between epididymal epithelial cells by volume electron microscopy

Xia Li, Feng Qiao, Jiansheng Guo, Ting Jiang, Huifang Lou, Huixia Li, Gangcai Xie, Hangjun Wu, Weizhen Wang, Ruoyu Pei,…

A new straightforward method for semi-automated segmentation of trabecular bone from cortical bone in diverse and challenging morphologies

Eva C. Herbst, Alessandro A. Felder, Lucinda A. E. Evans, Sara Ajami, Behzad Javaheri and Andrew A. Pitsillides

Segmentation of cortical bone, trabecular bone, and medullary pores from micro-CT images using 2D and 3D deep learning models

Andrew H. Lee, Julian M. Moore, Brandon Vera Covarrubias, Leigha M. Lynch

Architecture of the chikungunya virus replication organelle

Timothée Laurent, Pravin Kumar, Susanne Liese, Farnaz Zare, Mattias Jonasson, Andreas Carlson, Lars-Anders Carlson.

Advanced multi-scale characterization of loess microstructure: Integrating μXCT and FIB-SEM for detailed fabric analysis and geotechnical implications

B. Yu, T.A. Dijkstra, W. Fan, I.J. Smalley, Y.N. Wei, L.S. Deng

Advanced multi-scale characterization of loess microstructure: Integrating μXCT and FIB-SEM for detailed fabric analysis and geotechnical implications

B. Yu, T.A. Dijkstra, W. Fan, I.J. Smalley, Y.N. Wei, L.S. Deng

3D micro-structural changes of an artificial flow channel in wellbore cement under geologic CO2 storage conditions: Combined effect of effective stress and flow

Manguang Gan, Liwei Zhang, Yan Wang, Kaiyuan Mei, Xiaojuan Fu, Xiaowei Cheng, Mingxing Bai, Hejuan Liu, Xiaochun Li

Investigating microstructure evolution of lithium metal during plating and stripping via operando X-ray tomographicmicroscopy

Matthew Sadd, Shizhao Xiong, Jacob R. Bowen, Federica Marone, Aleksandar Matic

Dynamic changes in endoplasmic reticulum morphology and its contact with the plasma membrane in motor neurons in response to nerve injury

Mahmoud Elgendy,Hiromi Tamada, Takaya Taira, Yuma Iio, Akinobu Kawamura, Ayusa Kunogi, Yuka Mizutani, Hiroshi Kiyama

Experimental investigation on the physical-thermal properties of Nanan granite after air and water cooling for deep geothermal heat extraction

Zhennan Zhu, Shengqi Yang, Ren Wang, Jingyu Xie, Nuocheng Tian, Hong Tian, Jun Zheng, Guosheng Jiang, Bin Dou

For Research Use Only. Not for use in diagnostic procedures.